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Academic Journal

GenEpi: gene-based epistasis discovery using machine learning.

Subjects: Epistasis, Genetic* ; Machine Learning* ; Software*

  • Source: BMC bioinformatics [BMC Bioinformatics] 2020 Feb 24; Vol. 21 (1), pp. 68. Date of Electronic Publication: 2020 Feb 24.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium:

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Academic Journal

Recommendations for performance optimizations when using GATK3.8 and GATK4.

  • Authors : Heldenbrand JR; National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, 1205 W. Clark St., Urbana, IL, USA.; Baheti S

Subjects: Software*; Genomics/Genomics/Genomics/*methods; Algorithms

  • Source: BMC bioinformatics [BMC Bioinformatics] 2019 Nov 08; Vol. 20 (1), pp. 557. Date of Electronic Publication: 2019 Nov Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium:

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Academic Journal

FunFam protein families improve residue level molecular function prediction.

  • Authors : Scheibenreif L; Department of Informatics, Bioinformatics & Computational Biology - i12, TUM (Technical University of Munich), Boltzmannstr. 3, 85748, Garching/Munich, Germany. .; Littmann M

Subjects: Protein Domains*; Proteins/Proteins/Proteins/*chemistry; Binding Sites

  • Source: BMC bioinformatics [BMC Bioinformatics] 2019 Jul 18; Vol. 20 (1), pp. 400. Date of Electronic Publication: 2019 Jul Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium:

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Academic Journal

SRAssembler: Selective Recursive local Assembly of homologous genomic regions.

  • Authors : McCarthy TW; Department of Biology, Indiana University, Bloomington, 47405, Indiana, USA.; Chou HC

Subjects: Software*; Genomics/Genomics/Genomics/*methods; Arabidopsis/Arabidopsis/Arabidopsis/genetics

  • Source: BMC bioinformatics [BMC Bioinformatics] 2019 Jul 02; Vol. 20 (1), pp. 371. Date of Electronic Publication: 2019 Jul Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium:

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Academic Journal

ViralPhos: incorporating a recursively statistical method to predict phosphorylation sites on virus proteins.

  • Source: BMC Bioinformatics; 2013, Vol. 14 Issue Suppl 16, p1-11, 11p, 1 Color Photograph, 3 Diagrams, 3 Charts, 2 Graphs

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Academic Journal

Genes2FANs: connecting genes through functional association networks.

Subjects: GENES; PROTEIN-protein interactions; MOLECULAR association

  • Source: BMC Bioinformatics; 2012, Vol. 13 Issue 1, p156-168, 13p, 1 Black and White Photograph, 3 Diagrams, 3 Charts, 5 Graphs

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Academic Journal

A randomized approach to speed up the analysis of large-scale read-count data in the application of CNV detection.

  • Authors : Wang W; Department of Computer Science, University of North Carolina at Chapel Hill, 201 S. Columbia St., Chapel Hill, 27599-3175, USA.; Sun W

Subjects: DNA Copy Number Variations*; Genomics/Genomics/Genomics/*methods; Algorithms

  • Source: BMC bioinformatics [BMC Bioinformatics] 2018 Mar 01; Vol. 19 (1), pp. 74. Date of Electronic Publication: 2018 Mar 01.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium:

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Academic Journal

Investigation and identification of protein γ-glutamyl carboxylation sites.

Subjects: CARBOXYLATION; GLUTAMIC acid; ENDOPLASMIC reticulum

  • Source: BMC Bioinformatics; 2011 Supplement 13, Vol. 12 Issue Suppl 13, p1-11, 11p, 4 Charts, 3 Graphs

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Academic Journal

Variational attenuation correction in two-view confocal microscopy.

  • Authors : Schmidt T; Department of Computer Science, Albert-Ludwigs-Universität, Georges-Köhler-Allee Geb, 52, 79110 Freiburg, Germany. .; Dürr J

Subjects: Computational Biology*/Computational Biology*/Computational Biology*/methods ; Image Interpretation, Computer-Assisted* ; Microscopy, Confocal*/Microscopy, Confocal*/Microscopy, Confocal*/methods

  • Source: BMC bioinformatics [BMC Bioinformatics] 2013 Dec 18; Vol. 14, pp. 366. Date of Electronic Publication: 2013 Dec 18.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium:

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